diff --git a/arch/powerpc/platforms/powernv/pci-ioda.c b/arch/powerpc/platforms/powernv/pci-ioda.c
index 2dc64ca..cc6a7c4 100644
--- a/arch/powerpc/platforms/powernv/pci-ioda.c
+++ b/arch/powerpc/platforms/powernv/pci-ioda.c
@@ -1022,6 +1022,15 @@ static void pnv_ioda_setup_same_PE(struct pci_bus *bus, struct pnv_ioda_pe *pe)
 				pci_name(dev));
 			continue;
 		}
+
+		/*
+		 * In partial hotplug case, the PCI device might be still
+		 * associated with the PE and needn't attach it to the PE
+		 * again.
+		 */
+		if (pdn->pe_number != IODA_INVALID_PE)
+			continue;
+
 		pdn->pcidev = dev;
 		pdn->pe_number = pe->pe_number;
 		if ((pe->flags & PNV_IODA_PE_BUS_ALL) && dev->subordinate)
@@ -1040,6 +1049,18 @@ static struct pnv_ioda_pe *pnv_ioda_setup_bus_PE(struct pci_bus *bus, bool all)
 	struct pci_controller *hose = pci_bus_to_host(bus);
 	struct pnv_phb *phb = hose->private_data;
 	struct pnv_ioda_pe *pe = NULL;
+	unsigned int pe_num;
+
+	/*
+	 * In partial hotplug case, the PE instance might be still alive.
+	 * We should reuse it instead of allocating a new one.
+	 */
+	pe_num = phb->ioda.pe_rmap[bus->number << 8];
+	if (pe_num != IODA_INVALID_PE) {
+		pe = &phb->ioda.pe_array[pe_num];
+		pnv_ioda_setup_same_PE(bus, pe);
+		return NULL;
+	}
 
 	/* Check if PE is determined by M64 */
 	if (phb->pick_m64_pe)
@@ -1154,30 +1175,6 @@ static void pnv_ioda_setup_npu_PEs(struct pci_bus *bus)
 		pnv_ioda_setup_npu_PE(pdev);
 }
 
-static void pnv_ioda_setup_PEs(struct pci_bus *bus)
-{
-	struct pci_dev *dev;
-
-	pnv_ioda_setup_bus_PE(bus, false);
-
-	list_for_each_entry(dev, &bus->devices, bus_list) {
-		if (dev->subordinate) {
-			if (pci_pcie_type(dev) == PCI_EXP_TYPE_PCI_BRIDGE)
-				pnv_ioda_setup_bus_PE(dev->subordinate, true);
-			else
-				pnv_ioda_setup_PEs(dev->subordinate);
-		}
-	}
-}
-
-/*
- * Configure PEs so that the downstream PCI buses and devices
- * could have their associated PE#. Unfortunately, we didn't
- * figure out the way to identify the PLX bridge yet. So we
- * simply put the PCI bus and the subordinate behind the root
- * port to PE# here. The game rule here is expected to be changed
- * as soon as we can detected PLX bridge correctly.
- */
 static void pnv_pci_ioda_setup_PEs(void)
 {
 	struct pci_controller *hose, *tmp;
@@ -1185,22 +1182,11 @@ static void pnv_pci_ioda_setup_PEs(void)
 
 	list_for_each_entry_safe(hose, tmp, &hose_list, list_node) {
 		phb = hose->private_data;
-
-		/* M64 layout might affect PE allocation */
-		if (phb->reserve_m64_pe)
-			phb->reserve_m64_pe(hose->bus, NULL, true);
-
-		/*
-		 * On NPU PHB, we expect separate PEs for individual PCI
-		 * functions. PCI bus dependent PEs are required for the
-		 * remaining types of PHBs.
-		 */
 		if (phb->type == PNV_PHB_NPU) {
 			/* PE#0 is needed for error reporting */
 			pnv_ioda_reserve_pe(phb, 0);
 			pnv_ioda_setup_npu_PEs(hose->bus);
-		} else
-			pnv_ioda_setup_PEs(hose->bus);
+		}
 	}
 }
 
@@ -2655,6 +2641,9 @@ static void pnv_pci_ioda2_setup_dma_pe(struct pnv_phb *phb,
 {
 	int64_t rc;
 
+	if (!pnv_pci_ioda_pe_dma_weight(pe))
+		return;
+
 	/* TVE #1 is selected by PCI address bit 59 */
 	pe->tce_bypass_base = 1ull << 59;
 
@@ -2686,47 +2675,6 @@ static void pnv_pci_ioda2_setup_dma_pe(struct pnv_phb *phb,
 		pnv_ioda_setup_bus_dma(pe, pe->pbus);
 }
 
-static void pnv_ioda_setup_dma(struct pnv_phb *phb)
-{
-	struct pci_controller *hose = phb->hose;
-	struct pnv_ioda_pe *pe;
-	unsigned int weight;
-
-	/* If we have more PE# than segments available, hand out one
-	 * per PE until we run out and let the rest fail. If not,
-	 * then we assign at least one segment per PE, plus more based
-	 * on the amount of devices under that PE
-	 */
-	pr_info("PCI: Domain %04x has %d available 32-bit DMA segments\n",
-		hose->global_number, phb->ioda.dma32_count);
-
-	/* Walk our PE list and configure their DMA segments */
-	list_for_each_entry(pe, &phb->ioda.pe_list, list) {
-		weight = pnv_pci_ioda_pe_dma_weight(pe);
-		if (!weight)
-			continue;
-
-		/*
-		 * For IODA2 compliant PHB3, we needn't care about the weight.
-		 * The all available 32-bits DMA space will be assigned to
-		 * the specific PE.
-		 */
-		if (phb->type == PNV_PHB_IODA1) {
-			pnv_pci_ioda1_setup_dma_pe(phb, pe);
-		} else if (phb->type == PNV_PHB_IODA2) {
-			pe_info(pe, "Assign DMA32 space\n");
-			pnv_pci_ioda2_setup_dma_pe(phb, pe);
-		} else if (phb->type == PNV_PHB_NPU) {
-			/*
-			 * We initialise the DMA space for an NPU PHB
-			 * after setup of the PHB is complete as we
-			 * point the NPU TVT to the the same location
-			 * as the PHB3 TVT.
-			 */
-		}
-	}
-}
-
 #ifdef CONFIG_PCI_MSI
 static void pnv_ioda2_msi_eoi(struct irq_data *d)
 {
@@ -3193,41 +3141,6 @@ static void pnv_ioda_setup_pe_seg(struct pnv_ioda_pe *pe)
 	}
 }
 
-static void pnv_pci_ioda_setup_seg(void)
-{
-	struct pci_controller *tmp, *hose;
-	struct pnv_phb *phb;
-	struct pnv_ioda_pe *pe;
-
-	list_for_each_entry_safe(hose, tmp, &hose_list, list_node) {
-		phb = hose->private_data;
-
-		/* NPU PHB does not support IO or MMIO segmentation */
-		if (phb->type == PNV_PHB_NPU)
-			continue;
-
-		list_for_each_entry(pe, &phb->ioda.pe_list, list) {
-			pnv_ioda_setup_pe_seg(pe);
-		}
-	}
-}
-
-static void pnv_pci_ioda_setup_DMA(void)
-{
-	struct pci_controller *hose, *tmp;
-	struct pnv_phb *phb;
-
-	list_for_each_entry_safe(hose, tmp, &hose_list, list_node) {
-		pnv_ioda_setup_dma(hose->private_data);
-
-		/* Mark the PHB initialization done */
-		phb = hose->private_data;
-		phb->initialized = 1;
-	}
-
-	pnv_pci_ioda_setup_iommu_api();
-}
-
 static void pnv_pci_ioda_create_dbgfs(void)
 {
 #ifdef CONFIG_DEBUG_FS
@@ -3238,6 +3151,9 @@ static void pnv_pci_ioda_create_dbgfs(void)
 	list_for_each_entry_safe(hose, tmp, &hose_list, list_node) {
 		phb = hose->private_data;
 
+		/* Notify initialization of PHB done */
+		phb->initialized = 1;
+
 		sprintf(name, "PCI%04x", hose->global_number);
 		phb->dbgfs = debugfs_create_dir(name, powerpc_debugfs_root);
 		if (!phb->dbgfs)
@@ -3250,9 +3166,7 @@ static void pnv_pci_ioda_create_dbgfs(void)
 static void pnv_pci_ioda_fixup(void)
 {
 	pnv_pci_ioda_setup_PEs();
-	pnv_pci_ioda_setup_seg();
-	pnv_pci_ioda_setup_DMA();
-
+	pnv_pci_ioda_setup_iommu_api();
 	pnv_pci_ioda_create_dbgfs();
 
 #ifdef CONFIG_EEH
@@ -3302,6 +3216,45 @@ static resource_size_t pnv_pci_window_alignment(struct pci_bus *bus,
 	return phb->ioda.io_segsize;
 }
 
+static void pnv_pci_setup_bridge(struct pci_bus *bus, unsigned long type)
+{
+	struct pci_controller *hose = pci_bus_to_host(bus);
+	struct pnv_phb *phb = hose->private_data;
+	struct pci_dev *bridge = bus->self;
+	struct pnv_ioda_pe *pe;
+	bool all = (pci_pcie_type(bridge) == PCI_EXP_TYPE_PCI_BRIDGE);
+
+	/* Don't assign PE to PCI bus, which doesn't have subordinate devices */
+	if (list_empty(&bus->devices))
+		return;
+
+	/* Reserve PEs according to used M64 resources */
+	if (phb->reserve_m64_pe)
+		phb->reserve_m64_pe(bus, NULL, all);
+
+	/*
+	 * Assign PE. We might run here because of partial hotplug.
+	 * For the case, we just pick up the existing PE and should
+	 * not allocate resources again.
+	 */
+	pe = pnv_ioda_setup_bus_PE(bus, all);
+	if (!pe)
+		return;
+
+	pnv_ioda_setup_pe_seg(pe);
+	switch (phb->type) {
+	case PNV_PHB_IODA1:
+		pnv_pci_ioda1_setup_dma_pe(phb, pe);
+		break;
+	case PNV_PHB_IODA2:
+		pnv_pci_ioda2_setup_dma_pe(phb, pe);
+		break;
+	default:
+		pr_warn("%s: No DMA for PHB#%d (type %d)\n",
+			__func__, phb->hose->global_number, phb->type);
+	}
+}
+
 #ifdef CONFIG_PCI_IOV
 static resource_size_t pnv_pci_iov_resource_alignment(struct pci_dev *pdev,
 						      int resno)
@@ -3379,6 +3332,7 @@ static const struct pci_controller_ops pnv_pci_ioda_controller_ops = {
 #endif
 	.enable_device_hook	= pnv_pci_enable_device_hook,
 	.window_alignment	= pnv_pci_window_alignment,
+	.setup_bridge		= pnv_pci_setup_bridge,
 	.reset_secondary_bus	= pnv_pci_reset_secondary_bus,
 	.dma_set_mask		= pnv_pci_ioda_dma_set_mask,
 	.dma_get_required_mask	= pnv_pci_ioda_dma_get_required_mask,
